Recent Publications

Background De novo transcriptome assemblies are required prior to analyzing RNAseq data from a species without an existing reference …

DNA sequencing technology has revolutionized the field of biology, shifting biology from a data-limited to data-rich state. Central to …

Abstract We present QIIME 2, an open-source microbiome data science platform accessible to users spanning the microbiome research …

The N2-fixing cyanobacterium Trichodesmium is intensely studied because of the control this organism exerts over the cycling of carbon …

A metatranscriptome study targeting the protistan community was conducted off the coast of Southern California, at the San Pedro Ocean …

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Principal Investigator

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Harriet Alexander

Assistant Scientist

Plankton Ecology, Biological Oceanography, Bioinformatics, Open Science

Recent Posts

I recently found myself setting up a new computer, spinning up ~23864283.34 new projects in R, and wanting to stay somewhat organized …

Using SSH to tunnel into jupyter notebooks deployed remotely on slurm

Leveling up: welcome to your independent scientific position

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