**Harriet Alexander**

Latest

• Reverse engineering environmental metatranscriptomes clarifies best practices for eukaryotic assembly
• Bio-GO-SHIP: The Time Is Right to Establish Global Repeat Sections of Ocean Biology
• Marine microeukaryote metatranscriptomics: sample processing and bioinformatic workflow recommendations for ecological applications
• Microbiomes of bloom-forming Phaeocystis algae are stable and consistently recruited, with both symbiotic and opportunistic modes
• The osmolyte ties that bind: genomic insights into synthesis and breakdown of organic osmolytes in marine microbes
• EUKulele: Taxonomic annotation of the unsung eukaryotic microbes
• DMSP synthesis genes distinguish two types of DMSP producer phenotypes
• Auxotrophic interactions: A stabilizing attribute of aquatic microbial communities?
• Transcriptional response of Emiliania huxleyi under changing nutrient environments in the North Pacific Subtropical Gyre
• Keeping it light: (Re)analyzing community-wide datasets without major infrastructure
• Re-assembly, quality evaluation, and annotation of 678 microbial eukaryotic reference transcriptomes
• QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science
• Transcriptional patterns identify resource controls on the diazotroph Trichodesmium in the Atlantic and Pacific oceans
• Shifting metabolic priorities among key protistan taxa within and below the euphotic zone
• What are the type, direction, and strength of species, community, and ecosystem responses to warming in aquatic mesocosm studies and their dependency on experimental characteristics? A systematic review protocol
• Transcriptional response of the harmful raphidophyte Heterosigma akashiwo to nitrate and phosphate stress
• Conserved transcriptional responses to nutrient stress in bloom-forming algae
• Virus-host relationships of marine single-celled eukaryotes resolved from metatranscriptomics
• Integrating 'big data' into aquatic ecology: Challenges and opportunities
• Phosphorus availability regulates intracellular nucleotides in marine eukaryotic phytoplankton
• Probing the evolution, ecology and physiology of marine protists using transcriptomics
• Variable depth distribution of Trichodesmium clades in the North Pacific Ocean
• Functional group-specific traits drive phytoplankton dynamics in the oligotrophic ocean
• Metatranscriptome analyses indicate resource partitioning between diatoms in the field
• Sixty Years of Sverdrup: A Retrospective of Progress in the Study of Phytoplankton Blooms
• Identifying reference genes with stable expression from high throughput sequence data
• The transcriptome and proteome of the diatom Thalassiosira pseudonana reveal a diverse phosphorus stress response